The prevalence of Polycystic Ovarian syndrome is very common nowadays. In this syndrome there is marked decrease in the female characters with irregular or no menstruation, excess hairs on face, chest, stomach, thumbs, or toes, decrease in breast size, hair loss, acne, depression, weight gain, pelvic pain and infertility. It affects mainly the females of reproductive age. If left untreated, may result in infertility and even uterine cancer. Very little is known about status of lipid profile in this syndrome so the objective of the study was to compare lipid Profile in women suffering from polycystic ovarian syndrome and healthy women. The study comprised of 200 women of same reproductive age. Out of which 100 were healthy women and 100 were women suffering from polycystic ovarian syndrome. Lipid Profile was tested on auto analyzer by available commercial kits. Student t test were applied to determine difference between the two. SPSS software 20.0 was used for statistical analysis. We found the women suffering from polycystic ovarian syndrome had dyslipidemia as comparison to healthy women. This shows that dyslipidemia can be a risk factor for developing polycystic ovarian syndrome