This study aims to determine how the implementation of the Government Performance Accountability System (SAKIP) was evaluated based Performance Management Balanced Scorecard. Impact of the implementation of the Government Performance Accountability System in improving the performance of all employees at the Bureau Secretariat Organization of South Kalimantan Province. The research was conducted using a qualitative descriptive study, through interviews with sources and conduct performance document related documentation. The data analysis technique used in this study is that the data reduction, data display, and conclusion drawing/verification. The result is the implementation of the planning performance, especially in the process of leveling performance, Among the Balanced Scorecard SAKIP there are differences in how the preparation, which uses four perspectives SAKIP not used the Balanced Scorecard. Besides the preparation of programs and activities in SAKIP can only specify a defined set of activities, without being able to choose a program that will be implemented. The process of measuring, reporting, evaluation, and monitoring of similar performance between SAKIP and Balanced Scorecard. The impact caused by the implementation of the Bureau Organization SAKIP that there is an increased achievement of good performance on the customer perspective, Finance, and Internal Processes. But for the Learning and Growth perspective still does not have a significant impact.